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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015888348.1_cds_XP_016442915.1_38130
CDS Infomation

[gene=LOC107768307] [db_xref=GeneID:107768307] [protein=aspartic proteinase CDR1-like] [protein_id=XP_016442915.1] [location=14848..16215] [gbkey=CDS]
Sequence

ATGAAGATGAATACTAAAGCTAGTACTCTCTTTTCTACATTTACTTTTTTAGCTTTTTTT
CACCTTTCTTTAGTTTCTTGTCGCAAAATAATAAGCAATCCTAGTGGAAATGGCTTCACT
CTTGATCTTATCCATCGCGATTCTCCTCTTTCGCCTTTCTACAACCCATCAATTACACAT
TCAAACCGCCTACGAAACGCCTTCCTTCGATCATTTTCACGGGAATCTTTCTTCAAGAAA
AGTTCCTTTGCTAGTGCTAATGACACAATCCAATCGGATATTATTCCAATCCCAGGGGAA
TATCTTATGAAAATTTCTATTGGAACCCCACCAGTTGAAATTATAGCCATAGCTGATACT
GGTAGTGATTTAACATGGACACAATGTAAGCCTTGCACTAGTTGTTTCAAACAAACAGCC
CCTATTTTTGATTCCAAACAAAGCTCTACTTATAAAACCATAGGGTGTAACGCTGAAGAA
TGTGCATCACTAGAAACTTCTTCTTGTGTGAGAGGAAATATTTGTGAATATCAAATGAGT
TATGGTGACCAATCACAAACTATTGGTGATCTTGCTTTTGACAAATTCACATTTCCTTCT
ACTTCTGGAAATAATGTTTCTATTCCTAATGTTGTGTTTGGTTGTGGTCATGACAATAGT
GGCACATTCAATAACTATACTTCTGGTATTATTGGCTTAGGTGGTGGTGAAGTCTCAATT
GTCAACCAATTGGATAAACAAATCAAAGGGAAATTCTCTTATTGTTTAATCCCAATTCCA
TTACAATCATCTATTTCCAATGCTACAAGTCATATCAACTTTGGCAATAGTGCCACTGTG
TATGGTCCTAATGTCGTTTCAACTCCCTTGATAAAAAAGGAACCGTCCACGTTCTACTAT
CTAAATTTGGAAGGAATTAGCGTTGGGAATAAGAGGGTAGAATTCAAATCTTCTAAAATT
GCTTCTTCTAATGCTTTTGGTGGTGATGAAGGTAACATTATAATTGATTCTGGTACGACG
TTGACTTTTTTGCCTAATGACTTTTACTTGAATTTGGAGTCGATATTGTTGGAATCGATC
AATGCAACTAGAATTGATGATCCTTCGGGCACTTTTGGTATCTGTTACGAGTCTAAGGAT
GGTACTATTGATGCTCCCAAAATTGTCGCGCATTTTACTGATGCTGATTTAGTGTTGGCG
CCTTCGAGCACGTTTGCAGAAGTGGAGGAAGGTTTGGTTTGTCTTACATTAGTGCCAGCA
GAACAAATTGCTATTTTTGGAAACTTGGCACATGCGAATTTCCTAATTGGATATGATCTT
GTTGCTAACAAAGTCTCTTTCAAGCCTACTGATTGCACTAAGTACTAA

Peptide Sequence

PEP ID

XP_016442915.1
PEP Infomation

PREDICTED: aspartic proteinase CDR1-like [Nicotiana tabacum]
Sequence

MKMNTKASTLFSTFTFLAFFHLSLVSCRKIISNPSGNGFTLDLIHRDSPLSPFYNPSITH
SNRLRNAFLRSFSRESFFKKSSFASANDTIQSDIIPIPGEYLMKISIGTPPVEIIAIADT
GSDLTWTQCKPCTSCFKQTAPIFDSKQSSTYKTIGCNAEECASLETSSCVRGNICEYQMS
YGDQSQTIGDLAFDKFTFPSTSGNNVSIPNVVFGCGHDNSGTFNNYTSGIIGLGGGEVSI
VNQLDKQIKGKFSYCLIPIPLQSSISNATSHINFGNSATVYGPNVVSTPLIKKEPSTFYY
LNLEGISVGNKRVEFKSSKIASSNAFGGDEGNIIIDSGTTLTFLPNDFYLNLESILLESI
NATRIDDPSGTFGICYESKDGTIDAPKIVAHFTDADLVLAPSSTFAEVEEGLVCLTLVPA
EQIAIFGNLAHANFLIGYDLVANKVSFKPTDCTKY

Transcript Sequence

Gene sequence data has not been registered.